Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs11632519 chr15:42123267 G/A 1.49E-5 283 26.6 24.3 16.38 KM Plot
KIRP rs11641675 chr16:90031427 T/A 5.47E-5 285 25.15 38.05 10.23 KM Plot
KIRP rs11642053 chr16:89560567 C/T 0.000149 285 25.62 26.83 15.15 KM Plot
KIRP rs11643147 chr16:90038647 A/G 0.000187 285 24.73 42.52 10.23 KM Plot
KIRP rs11643722 chr16:90026775 A/G 1.86E-8 283 24.8 34.82 5.95 KM Plot
KIRP rs11645183 chr16:90031419 G/A 5.47E-5 285 25.15 38.05 10.23 KM Plot
KIRP rs11645212 chr16:90049434 T/C 0.000191 287 24.73 38.05 10.23 KM Plot
KIRP rs116458685 chr10:124796430 C/T 2.12E-9 285 25.67 26.37 13.17 KM Plot
KIRP rs11647253 chr16:90082016 A/G 1.44E-7 284 24.67 34.48 10.7 KM Plot
KIRP rs11648818 chr16:90049323 G/A 0.000191 287 24.73 38.05 10.23 KM Plot
KIRP rs11649229 chr16:90049589 C/T 0.000191 287 24.73 38.05 10.23 KM Plot
KIRP rs116556990 chr7:65407337 G/A 1.76E-6 287 26.2 20.9 10.83 KM Plot
KIRP rs11658229 chr17:10223422 G/A 4.66E-6 276 26.28 27.25 15.53 KM Plot
KIRP rs11676282 chr2:100935320 A/G 9.88E-6 286 24.9 25.82 26 KM Plot
KIRP rs11677524 chr2:100935329 T/C 9.89E-5 287 22.8 26 26.37 KM Plot